proteome science سال:2011 - دوره:9

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proteome science
سال:2011 - دوره:9 - شماره:SUPPL. 1

A binary matrix factorization algorithm for protein complex prediction A new method for alignment of LC-MALDI-TOF data ATPsite: Sequence-based prediction of ATP-binding residues An effective hybrid of hill climbing and genetic algorithm for 2D triangular protein structure prediction Applications of graph theory in protein structure identification Bayesian non-negative factor analysis for reconstructing transcription factor mediated regulatory networks Decomposing PPI networks for complex discovery Fast subcellular localization by cascaded fusion of signal-based and homology-based methods Identification of protein-RNA interaction sites using the information of spatial adjacent residues NWE: Node-weighted expansion for protein complex prediction using random walk distances Ontology integration to identify protein complex in protein interaction networks Peptide charge state determination of tandem mass spectra from low-resolution collision induced dissociation Predicting DNA-binding locations and orientation on proteins using knowledge-based learning of geometric properties Prediction of 492 human protein kinase substrate specificities Prediction of DNA-binding protein based on statistical and geometric features and support vector machines Processing methods for signal suppression of FTMS data Protein complex detection with semi-supervised learning in protein interaction networks SProt: Sphere-based protein structure similarity algorithm Sequence and structural features of binding site residues in protein-protein complexes: Comparison with protein-nucleic acid complexes Unsupervised Integration of Multiple Protein Disorder Predictors: The Method and Evaluation on CASP7,CASP8 and CASP9 Data