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The Baker's yeast diploid genome is remarkably stable in vegetative growth and meiosis
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نویسنده
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nishant k.t. ,wei w. ,mancera e. ,argueso j.l. ,schlattl a. ,delhomme n. ,ma x. ,bustamante c.d. ,korbel j.o. ,gu z. ,steinmetz l.m. ,alani e.
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منبع
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plos genetics - 2010 - دوره : 6 - شماره : 9
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چکیده
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Accurate estimates of mutation rates provide critical information to analyze genome evolution and organism fitness. we used whole-genome dna sequencing,pulse-field gel electrophoresis,and comparative genome hybridization to determine mutation rates in diploid vegetative and meiotic mutation accumulation lines of saccharomyces cerevisiae. the vegetative lines underwent only mitotic divisions while the meiotic lines underwent a meiotic cycle every ~20 vegetative divisions. similar base substitution rates were estimated for both lines. given our experimental design,these measures indicated that the meiotic mutation rate is within the range of being equal to zero to being 55-fold higher than the vegetative rate. mutations detected in vegetative lines were all heterozygous while those in meiotic lines were homozygous. a quantitative analysis of intra-tetrad mating events in the meiotic lines showed that inter-spore mating is primarily responsible for rapidly fixing mutations to homozygosity as well as for removing mutations. we did not observe 1-2 nt insertion/deletion (in-del) mutations in any of the sequenced lines and only one structural variant in a non-telomeric location was found. however,a large number of structural variations in subtelomeric sequences were seen in both vegetative and meiotic lines that did not affect viability. our results indicate that the diploid yeast nuclear genome is remarkably stable during the vegetative and meiotic cell cycles and support the hypothesis that peripheral regions of chromosomes are more dynamic than gene-rich central sections where structural rearrangements could be deleterious. this work also provides an improved estimate for the mutational load carried by diploid organisms. © 2010 nishant et al.
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آدرس
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department of molecular biology and genetics,cornell university,ithaca,ny, United States, european molecular biology laboratory,heidelberg, Germany, european molecular biology laboratory,heidelberg, Germany, department of molecular genetics and microbiology,duke university medical center,durham,nc,united states,department of environmental and radiological health sciences,colorado state university,fort collins,co, United States, european molecular biology laboratory,heidelberg, Germany, european molecular biology laboratory,heidelberg, Germany, department of biological statistics and computational biology,cornell university,ithaca,ny, United States, department of genetics,stanford university,stanford,ca, United States, european molecular biology laboratory,heidelberg, Germany, division of nutritional sciences,cornell university,ithaca,ny, United States, european molecular biology laboratory,heidelberg, Germany, department of molecular biology and genetics,cornell university,ithaca,ny, United States
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Authors
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