Detection of Different Genotypes of Clostridium perfringens in Feces of Healthy Dairy Cattle from China using Real-Time Duplex PCR Assay

Dual-labeled fluorescence hybridization probe-based multiplex quantitative realtime polymerase chain reaction (qpcr) assay was used for the detection of clostridium perfringens toxin genes alpha (cpa), beta (cpb), iota (ia), epsilon (etx), beta2 (cpb2) and enterotoxin (cpe) directly from the feces of cattle. fecal samples from 261 lactating cattle, belonging to three dairy herds in ningxia (china), were examined using the developed assays. the duplex qpcr assay revealed that cpa, etx, cpb2 and cpe toxin genes were detected in 176 (100%), 15 (8.5%), 142 (80.7%) and 4 (2.3%) of 176 pcr positive samples, respectively. the findings of this study revealed that c. perfringens beta2-toxin-producing strains were widely prevalent in lactating cows in ningxia, possibly playing an important role in c. perfringensassociated diarrheal disease.