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   immune landscape and a novel immunotherapy-related gene signature associated with clinical outcome in early-stage lung adenocarcinoma  
   
نویسنده bao xuanwen ,shi run ,zhao tianyu ,wang yanfang
منبع journal of molecular medicine - 2020 - دوره : 98 - شماره : 6 - صفحه:805 -818
چکیده    Patients with early-stage lung adenocarcinoma (luad) exhibit different overall survival (os) rates and immunotherapy responses. understanding the immune landscape facilitates the personalized treatment of luad. the immune cell populations in tumour tissues were quantified to depict the immune landscape in early-stage luad patients in the cancer genome atlas (tcga). early-stage luad patients in three immune clusters identified by the immune landscape exhibited different survival potentials. a prognostic immune-related gene signature was built to predict the survival of early-stage luad patients. several machine learning methods (support vector machine, naive bayes, random forest, and neural network-based deep learning) were applied to train the classifiers to identify the immune clusters in early-stage luad based on the gene signature. the four classifiers exhibited a robust effect in identifying the immune clusters. a random forest regression model identified that tp53 was the most important gene mutation associated with the immune-related signature. furthermore, a decision tree and a nomogram were constructed based on the immune-related gene signature and clinicopathological traits to improve risk stratification and quantify risk assessment for individual patients. five external test cohorts were applied to validate the accuracy of the immune-related signature. our study might contribute to the development of immunotherapy and the personalized treatment of early-stage luad.
کلیدواژه early-stage lung adenocarcinoma (luad) ,immune landscape ,prognostic model ,overall survival
آدرس german research center for environmental health, institute of radiation biology, helmholtz center munich, germany. technical university munich (tum), germany, university hospital, ludwig maximilian university of munich, department of radiation oncology, germany, university hospital, ludwig maximilian university of munich; comprehensive pneumology center (cpc) munich, institute and clinic for occupational, member dzl; german center for lung research, germany. german research center for environmental health, institute of epidemiology, helmholtz zentrum münchen, germany, ludwig-maximilians-universität münchen (lmu), germany
 
     
   
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