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Multigene panel testing beyond BRCA1/2 in breast/ovarian cancer Spanish families and clinical actionability of findings
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نویسنده
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Sandra Bonache ,Irene Esteban ,Alejandro Moles-Fernández ,Anna Tenés ,Laura Duran-Lozano ,Gemma Montalban ,Vanessa Bach ,Estela Carrasco ,Neus Gadea ,Adrià López-Fernández ,Sara Torres-Esquius ,Francesco Mancuso ,Ginevra Caratú ,Ana Vivancos ,Noemí Tuset ,Judith Balmaña ,Sara Gutiérrez-Enríquez ,Orland Diez
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منبع
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journal of cancer research and clinical oncology - 2018 - دوره : 144 - شماره : 12 - صفحه:2495 -2513
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چکیده
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purposefew and small studies have been reported about multigene testing usage by massively parallel sequencing in european cancer families. there is an open debate about what genes should be tested, and the actionability of some included genes is under research. methods:we investigated a panel of 34 known high/moderate-risk cancer genes, including 16 related to breast or ovarian cancer (bc/oc) genes, and 63 candidate genes to bc/oc in 192 clinically suspicious of hereditary breast/ovarian cancer (hboc) spanish families without pathogenic variants in brca1 or brca2 (brca1/2). results:we identified 16 patients who carried a high- or moderate-risk pathogenic variant in eight genes: 4 palb2, 3 atm, 2 rad51d, 2 tp53, 2 apc, 1 brip1, 1 pten and 1 pms2. these findings led to increased surveillance or prevention options in 12 patients and predictive testing in their family members. we detected 383 unique variants of uncertain significance in known cancer genes, of which 35 were prioritized in silico. eighteen loss-of-function variants were detected in candidate bc/oc genes in 17 patients (1 bard1, 1 ercc3, 1 ercc5, 2 fance, 1 fanci, 2 fancl, 1 fancm, 1 mcph1, 1 ppm1d, 2 rbbp8, 3 recql4 and 1 with slx4 and xrcc2), three of which also carry pathogenic variants in known cancer genes. conclusion:seight percent of the brca1/2 negative patients carry pathogenic variants in other actionable genes. the multigene panel usage improves the diagnostic yield in hboc testing and it is an effective tool to identify potentially new candidate genes.
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کلیدواژه
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Breast/ovarian hereditary cancer ,BRCA1 or BRCA2 negative ,Panel testing by massively parallel sequencing ,Clinical actionability
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آدرس
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CELLEX CENTER, Oncogenetics Group, Lab 2.02A, Spain, VHIO city:Barcelona, High Risk and Cancer Prevention Group, Spain. Universitat Autònoma de Barcelona city:Bellaterra, Genetics and Microbiology Department, Spain, CELLEX CENTER, Oncogenetics Group, Lab 2.02A, Spain, University Hospital of Vall d’Hebron, Spain, CELLEX CENTER, Oncogenetics Group, Lab 2.02A, Spain, CELLEX CENTER, Oncogenetics Group, Lab 2.02A, Spain, CELLEX CENTER, Oncogenetics Group, Lab 2.02A, Spain, VHIO city:Barcelona, High Risk and Cancer Prevention Group, Spain, VHIO city:Barcelona, High Risk and Cancer Prevention Group, Spain. University Hospital of Vall d’Hebron, Medical Oncology Department, Spain, VHIO city:Barcelona, High Risk and Cancer Prevention Group, Spain, VHIO city:Barcelona, High Risk and Cancer Prevention Group, Spain, Vall d’Hebron Institute of Oncology, Cancer Genomics Group, Spain, Vall d’Hebron Institute of Oncology, Cancer Genomics Group, Spain, Vall d’Hebron Institute of Oncology, Cancer Genomics Group, Spain, Hospital Universitari Arnau de Vilanova, Medical Oncology Department, Spain, University Hospital of Vall d’Hebron, Medical Oncology Department, Spain. VHIO city:Barcelona, High Risk and Cancer Prevention Group, Spain, CELLEX CENTER, Oncogenetics Group, Lab 2.02A, Spain, CELLEX CENTER, Oncogenetics Group, Lab 2.02A, Spain. University Hospital of Vall d’Hebron, Spain
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Authors
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