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identification of the rs797045105 in the serac1 gene by whole-exome sequencing in a patient suspicious of megdel syndrome
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نویسنده
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zamani mina ,seifi tahereh ,zeighami jawaher ,mazaheri neda ,jahangirnezhad emad ,gholamzadeh minoo ,sedaghat alireza ,shariati gholamreza ,galehdari hamid
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منبع
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basic and clinical neuroscience - 2020 - دوره : 11 - شماره : 4 - صفحه:549 -556
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چکیده
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Introduction: whole exome sequencing (wes) has been increasingly utilized in genetic determinants of various inherited diseases. methods: we applied wes for a patient presenting 3-methylglutaconic aciduria (meg), deafness (d), encephalopathy (e), and leigh-like (l) syndrome. then sanger sequencing was used for the detected variant validation. results: we found an insertion, rs797045105 (chr6, 158571484, c>ccatg), in the serac1 gene with homozygous genotype in the patient and heterozygous genotype in her unaffected parents. notably, bioinformatics analysis using mutation taster (prob>0.99) and ddigin (prob=86.51) predicted this mutation as disease-causing. also, the variant was not present in our database, including 700 exome files. conclusion: these findings emphasize the pathogenicity of rs797045105 for megdel syndrome. on the other hand, our data shed light on the significance of wes application as a genetic test to identify and characterize the comprehensive spectrum of genetic variation and classification for patients with neuro-metabolic disorders.
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کلیدواژه
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whole-exome sequencing ,rs797045105 ,serac1 ,megdel
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آدرس
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narges medical genetics and prenatal diagnosis laboratory, iran. shahid chamran university of ahvaz, faculty of science, department of genetics, iran, narges medical genetics and prenatal diagnosis laboratory, iran. shahid chamran university of ahvaz, faculty of science, department of genetics, iran, narges medical genetics and prenatal diagnosis laboratory, iran, narges medical genetics and prenatal diagnosis laboratory, iran. shahid chamran university of ahvaz, faculty of science, department of genetics, iran, narges medical genetics and prenatal diagnosis laboratory, iran, narges medical genetics and prenatal diagnosis laboratory, iran, narges medical genetics and prenatal diagnosis laboratory, iran. ahvaz jundishapur university of medical sciences, diabetes research center, iran, narges medical genetics and prenatal diagnosis laboratory, iran. ahvaz jundishapur university of medical sciences, school of medicine, department of genetics, iran, narges medical genetics and prenatal diagnosis laboratory, iran. shahid chamran university of ahvaz, faculty of science, department of genetics, iran
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پست الکترونیکی
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galehdari187@yahoo.com
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Authors
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